I have recently given a series of four seminars on how the increased easy of computation has drastically changed how we should approach data analysis and statistics. I have edited the files replacing some of the photographs with images that allow me to release the four files under the CC BY-SA 4.0 licence.
Promising new front end for R “RStudio”
I just installed this program, and did a test run. Looks great for beta software. Replaces the whole R GUI. I am especially interested in Sweave support that is rather flaky in Tinn-R or requires a lot of setting changes in WinEdt. I will write again after some more testing. It is available for download at http://rstudio.org/ where there is also some documentation.
A blog about R
This one in Finnish: http://www.r-ohjelmointi.org/ Full of very interesting stuff on R. Recommended.
Some new R stuff
Because I have some plans for an R course in Moodle, and also because I need to do some plots, I looked around in the web to see if there was something new. I found quite a lot, at least new to me. One is the package ggplot2 that may be easier to use than lattice and produces graphs with a different look.
The author is Had Wickman.
An example:
# load package library(ggplot2) # generate some artificial data x=1:100 y2=x^2/100+rnorm(100)*5 # create a plot qplot(x,y2,geom=c("smooth","point"))
Here are some links:
ggplot2 the home page for the package with links to videos, slides, etc. The package itself is in CRAN.
The author‘s PhD thesis
Some slides.
He has also written a book on ggplot2.
He has written other interesting packages but I’ll write about them later.
Mixed effects models and extensions in ecology with R
I recently bought this book (a Christmas self-present), by Zuur et al., 2009, and am starting to go through it. If anyone is interested it is available in my office, to augment SenPEP’s already impressive R bibliography!
There is an associated website:
Mixed effects models and extensions in ecology with R
Rob Hyndman’s research tips
Rob Hyndman’s blog has lots of interesting material aimed at graduate students in statistics, also very useful for us, plant ecologists.
http://robjhyndman.com/researchtips/
From reading Rob’s blog came the idea to start this blog for our own group.